OpenMx Installation

Posted on
No user picture. nhajal Joined: 05/18/2013

Windows 8

Is it possible to get Open MX on Windows 8? When I enter:
"source('http://openmx.psyc.virginia.edu/getOpenMx.R')" I keep getting the following error message:

Warning in install.packages(pkgs = c("OpenMx"), repos = repos) :
argument 'lib' is missing: using 'C:\Users\Tassie\Documents/R/win-library/2.10'
trying URL 'http://openmx.psyc.virginia.edu/packages/bin/windows/contrib/2.10/OpenMx_1.3.2-2301.zip'
Error in download.file(url, destfile, method, mode = "wb", ...) :
cannot open URL 'http://openmx.psyc.virginia.edu/packages/bin/windows/contrib/2.10/OpenMx_1.3.2-2301.zip'

Posted on
Picture of user. pdeboeck Joined: 08/04/2009

_gfortran_copy_string

Hi Everyone,

I ran into this problem today while doing a new installation of OpenMx, and I was just curious if this looked familiar to anyone: "/nfs/home/pascal/R/x86_64-redhat-linux-gnu-library/2.15/OpenMx/libs/OpenMx.so: undefined symbol: _gfortran_copy_string"

Thanks!

> source('http://openmx.psyc.virginia.edu/getOpenMx.R')
1. single-threaded
2. multi-threaded [default]
Which version of OpenMx should I install? 1
Installing package(s) into '/nfs/home/pascal/R/x86_64-redhat-linux-gnu-library/2.15'
(as 'lib' is unspecified)

Posted on
No user picture. fnielsen Joined: 04/16/2013

Fail to Install on R 3.0 on Windows 7

I just upgraded to R 3.0 on my Windows 7 PC. I am now trying to reinstall OpenMx. I get the following error message:

> source('http://openmx.psyc.virginia.edu/getOpenMx.R')
Warning: unable to access index for repository http://openmx.psyc.virginia.edu/packages/bin/windows/contrib/3.0

package ‘OpenMx’ is available as a source package but not as a binary

Warning message:
package ‘OpenMx’ is not available (for R version 3.0.0)

Any suggestion on what to do appreciated!

Posted on
No user picture. roffe Joined: 03/10/2013

Install fails on MacOS X, linker error: Symbol not found: __gfortran_pow_r8_i4

I'm on a Mid-2009 MacBook Pro, Latest Mountain Lion, MacPorts GNU compilers and R 2.15.3.

These are the last relevant error message lines:

Error in dyn.load(file, DLLpath = DLLpath, ...) :
unable to load shared object '/opt/local/Library/Frameworks/R.framework/Versions/2.15/Resources/library/OpenMx/libs/x86_64/OpenMx.so':
dlopen(/opt/local/Library/Frameworks/R.framework/Versions/2.15/Resources/library/OpenMx/libs/x86_64/OpenMx.so, 6): Symbol not found: __gfortran_pow_r8_i4

Posted on
No user picture. S Clifford Joined: 02/19/2013

Very basic installation question

Hi, I'm a new user with an extremely basic installation question. Basically, the installation instructions provided on the website say:

"open up an R session and copy the following line into the R command line and press return.

source('http://openmx.psyc.virginia.edu/getOpenMx.R')

A few lines of R output will scroll by and you will be asked which type of OpenMx Installation you would like. "

Posted on
No user picture. halec Joined: 12/10/2012

"No such file" during install attempt

My install attempt on Windows 7 using R 2.15.1 is failing with the message below. Can you suggest solutions? Thanks!

> source('http://openmx.psyc.virginia.edu/getOpenMx.R')
trying URL 'http://openmx.psyc.virginia.edu/packages/bin/windows/contrib/2.15/OpenMx_1.3.2-2301.zip'
Content type 'application/zip' length 7964184 bytes (7.6 Mb)
opened URL
downloaded 7.6 Mb

Error in read.dcf(file.path(pkgname, "DESCRIPTION"), c("Package", "Type")) :
cannot open the connection
In addition: Warning messages:
1: In unzip(zipname, exdir = dest) : error 1 in extracting from zip file

Posted on
Picture of user. rabil Joined: 01/14/2010

Ubuntu 12.10 and 13.04 - Install Fails due to npsol error

I get similar errors in both 12.10 and 13.04:

checking for inst/npsol/linux/x86_64/gcc4.7/libnpsol.a... no
configure: error: npsol library not found
ERROR: configuration failed for package ‘OpenMx’

Why is this a problem with new versions?

Thanks.

Posted on
No user picture. airmax90 Joined: 11/13/2012

Error loading OpenMX

I installed OpenMx the way Mike told me in this thread: http://openmx.psyc.virginia.edu/thread/1729

It seemed, that everything worked fine, but when I try to load OpenMX I get this errormessage:

require(OpenMx)
Loading required package: OpenMx
Error in eval(expr, envir, enclos) :
konnte Funktion ".getNamespace" nicht finden
Zusätzlich: Warnmeldung:
package ‘OpenMx’ was built under R version 2.16.0
Error : unable to load R code in package ‘OpenMx’

Posted on
No user picture. airmax90 Joined: 11/13/2012

Problem on installing openMX on arch

i tried to install openmx with

source('http://openmx.psyc.virginia.edu/getOpenMx.R')

but i get this errormessage on my r-terminal:

> source('http://openmx.psyc.virginia.edu/getOpenMx.R')
1. single-threaded
2. multi-threaded [default]
Installing package(s) into ‘/home/martin/.rkward/library’
(as ‘lib’ is unspecified)
versuche URL 'http://openmx.psyc.virginia.edu/packages/src/contrib/OpenMx_1.3.1-2179.tar.gz'
Content type 'application/x-gzip' length 7267970 bytes (6.9 Mb)
URL geöffnet
==================================================

Posted on
Picture of user. smedland Joined: 08/04/2009

Need to run single-threaded on a Linux cluster

Hi
I need to find out how to run openMx singlethreaded on a Linux system running R 2.15.1
It seems to be running multi-threaded by default and spawning a couple of hundred threads which is causing issues on our cluster which runs a condor queueing system.
thanks
Sarah