metaSEM

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No user picture. Anonymous (not verified) Joined: 09/16/2024

tssem2 over a given pooled correlation matrix

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Hi again Mike,

I was wondering if this is possible:
Having the pooled correlation matrix and their standard errors, do you have any way to apply directly the second stage of tssem over that data? Any help would be very much appreciated.

Thanks a lot,

Laura

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No user picture. Anonymous (not verified) Joined: 09/16/2024

Not positive definite matrix

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Hi Mike,

I'm making a lot of progress with the package but I still have some questions.
When I try to run the tssem1 I get some non-positive definite matrix.
I think it is because the determinant is lower than 0. Do you have implemented partial least square or ridge to resolve this problem?

Thank you in advantage,

Laura

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No user picture. yahmed Joined: 06/24/2014

not positive definite and NA errors

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Hi Mike,

I am currently trying to fit a multivariate metaSEM model. I am getting a non-positive definite matrix when fitting a random effects model, and this is likely expected due to a lot missing data in the attached datafile. Would you agree that this is the reason behind the non-positive definite error? Please also note that I tried running the model with fewer studies that provided more data (the number of studies went from 108 to 44) but the errors were the same.

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No user picture. Anonymous (not verified) Joined: 09/16/2024

Error running REM in tssem1

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Hi Mike,
I am enjoying so much your package MetaSEM, thanks a lot! This is making a great advance in meta-analysis.
I am having a bit of problem running random effects with tseem1, any help would be very much appreciated!
I am trying to replicate Digman97 using a larger sample, here an example of a reduced sample of my data and the error I got.
> random1 <- tssem1(neo$data, neo$n, method="REM", RE.type="Diag")

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No user picture. James Lee Joined: 06/17/2013

difference between corrected input and raw input

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Dear professor Mike

I remember that you seem to mention from one of your article that a performance of MASEM model with and without artifact correction is worthy of scholarly attention.
Am I right? By the way, It has been the topic i am always wondering about since i read your article.
Corrected correlation might actually cause systematic bias, to some degree, compared to raw correlation.
However, this bias has nothing to do with performance maybe because it is more likely to do with estimation method and sample sizes.

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No user picture. vmccaughey Joined: 05/13/2014

Where to go from here?

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Hi Mike,

All of your posts have been extremely helpful. However, I do have a few remaining questions.

I read that it is easier to download the OpenMX and metaSEM packages in RStudio, so that's what I did and I think it worked. I just don't know how to test it - do you have any sample data sets that I could plug into a session to see if it works?

Also, do you recommend sticking with R instead of RStudio? We will be using it for an extensive project and don't want to run into problems down the line if RStudio doesn't work as well as R.

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No user picture. Anonymous (not verified) Joined: 09/16/2024

Installation Prevention Error

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Hello!

I am very new to this software. After installing R (version 3.1.0), I have copy pasted each code to install metaSEM. However, after installing OpenMX, ellipse, and mass packages, when it is time to install the metaSEM package, I keep recieving the same error. I have attached an image with the error code. Has anyone else had this problem / know how to help?

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No user picture. Anonymous (not verified) Joined: 09/16/2024

Two errors at Stage 1

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Hi all,

Thank you for this wonderful software and very useful forum for running metaSEM. I'm new to both R and metaSEM, but I've generally found it to be relatively straightforward with all the great resources available.

There are a pair of metaSEM models I'm running that have been giving me two separate error messages that I can't wrap my head around. These occur when running the Stage 1 portion of the script:

1. Error: The observed covariance matrix is not a symmetric matrix

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No user picture. jbauer Joined: 04/14/2014

Individual participant data

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Hello Mike,

in your 2014 article on MASEM (Behav Res, DOI 10.3758/s13428-013-0361-y) you mention individual participant data (IPD) meta-analysis as a tool for addressing issues in MASEM, such as categorical response variables. I am wondering what would be an advisable analytic strategy for MASEM with IPD (assuming a fixed effects model).

Here are several options I found:
(1) One approach could be to extract a correlation matrix from each study and analyze it with TSSEM in metaSEM.

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No user picture. jbauer Joined: 04/14/2014

Effects from TSSEM larger than in original studies

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Hi Mike,

many thanks for the fantastic metaSEM package! I used it to combine models from two original studies.

(1) What astonishes me is that some of the structural parameters estimates from TSSEM Stage 2 are even larger than the ones from the individual studies (e.g. study 1: beta = -.40; study two: beta = -.53; TSSEM2: beta = -.66). Naively I had expected that the comnbined TSSEM2 etimates should be somewhere between the ones of the original studies. I am wondering how this is possible. Can I trust this finding?