metaSEM

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No user picture. nastjuscha Joined: 06/28/2016

Missing values error without missings in the data?

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Dear Mike,

I'm afraid I have to ask you for help again.
I receive a following new error warning every time I try to run an FEM regardless of the constellation of variables from my dataset:
> summary(fixed1)
Error in if (pchisq(chi.squared, df = df, ncp = 0) >= upper) { :
missing value where TRUE/FALSE needed
Even if I try to run it only with first three variables (there are 146 full matrices without any missings) I have the same problem.
I appreciate any idea you can provide.

Regards,
Nastja

Posted on
No user picture. Arin A Joined: 07/04/2016

CI of indirect effects

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Dear all,

Being very new to MetaSEM as well as R, please accept my apology for such simple question.

Mike kindly corrected my code to conduct a correlation based MetaSEM.

I just wanted to be sure that the coefficients are the standardised coefficients. Also, I was wondering whether it is possible to get the CI of the indirect effects, to know whether these effects are significant or not.
I attached the code and the results.

Thank you in advance,
Regards,
Arin

Posted on
Picture of user. Juanda Joined: 05/18/2016

x is not positive definite! Help

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Dear Mike,

I'm a beginner in R and metaSEM. I'm performing a meta-analytic path model with 3 predictor variables, 1 mediator and 1 dependent variable (5 variables in total and 158 primary studies) as you can see in the figure.

I run the fix effects in the full dataset (158) but it is not possible because the missing values, but neither is possible to run the random effects (1stage).

Posted on
Picture of user. jasperd Joined: 06/28/2016

Using standard error in meta() and meta3()

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Hi Mike and others,

I've been running some three-level meta-analyses using meta3() with standard error as input instead of variance. However, the description of meta() and meta3() only mention the use of variance as input. Although I am aware it is easy to convert standard error to variance I was wondering whether it is ok to use standard error with meta() and meta3().

Thanks for the help all.

Best,
Jasper

Posted on
No user picture. Rutger Joined: 03/30/2016
Posted on
Picture of user. k.corker Joined: 10/05/2015

Nested models

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A fixed effect model is a more restricted version of a random effects model, when meta-analyzing correlations using tssem1(), correct? Is there a way to do a nested model test? I know the degrees of freedom for the difference test would be the number of random effects estimated. I'm tripped up because the fixed effect model gives many fit stats, whereas the random effects model only gives a -2 log likelihood.

Thank you!

Posted on
No user picture. Forscher_CG Joined: 03/21/2016

asycov missing values

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Hi Mike and other users,

I have a question concerning the the function asycov in the preparatory process for a Meta-Analysis using SEM and the WLS-Function. I have a manually created pooled correlation matrix (6x6) as there are some correlations I didn’t compute by myself. The problem is, that there are 4 missing values which resulted in the following error term when trying to calculate the covariance matrix with the asycov function:

Posted on
Picture of user. forscher Joined: 03/05/2013

Differences between meta-analytic indirect effects estimated using meta() and tssem2()

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Hi Mike and metaSEM users,

First of all, thank you, Mike, for maintaining such an active presence on this forum! It makes a HUGE difference as a user to be able to get questions answered from the package maintainer within a pretty reasonable timeframe. :)

I had another question about the meta-analytic indirect effects that are estimated by indirectEffect() (and then meta-analytically combined using meta() ).

Posted on
No user picture. dwils03 Joined: 12/05/2012

R-squared (Explained Variance) for DVs in a Stage 2 MetaSEM

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Hi All,

I need to calculate variance explained for my endogenous latent variables after fitting the pooled data to a structural model in Stage 2 (using tssem2). I have specified a model (all observed variables) with 3 dependent variables (two of which are mediators, with one key "final" dependent variable).

(I guess I'll drop in the A matrix so you know what it looks like:)

KSSE Prestige EnjHlpg BossExp ExtrMotiv Recip TrustB ATS ITS KS

Posted on
No user picture. SophieIL Joined: 11/05/2015

tssem1 Inverse variance weighting

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Hello!

I'm trying to work with the metaSEM package for the first time, and I really appreciate it so far!
Why is weighting of the ES by the inverse variance in tssem1 only implemented for fixed effects? Aside from the results of the SEM structure in tssem2, I would like to give readers of my results both FE and RE estimates of the pooled correlation matrix, but I want both to reflect the variance/sample size and they wouldn't be comparable if only one of the methods uses inverse weighting by the variance.