OpenMx Help

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Picture of user. mhunter Joined: 07/31/2009

Try My LISREL Objective

I've added a way to specify and fit LISREL models in OpenMx. The function is called mxLISRELObjective and it operates very similarly to the mxRAMObjective function. Currently, only matrix specification of LISREL models is possible, but I'm working on path specification.

Posted on
No user picture. dadrivr Joined: 01/19/2010

Starting values recommendations and guidelines

I'm trying to run a CFA model, and I'm receiving some status 6 (code red) errors that I suspect may be due to starting values. I have constrained variances to be positive and have moved the starting values around, but no success.

Two things: 1) do you have any recommendations on how to determine starting values for latent variances, residual variances, covariances, factor loadings, means, etc.? 2) Do you know where I could read more about guidelines for determining starting values?

Thanks!

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Picture of user. tbates Joined: 07/31/2009

BLAS/LAPACK routine 'DSYMV ' gave error code -5 from runHelper

hi all,
running a simple model f1->{a,b,c} where a & b are ordinal.

runs fine with cov data, or as a raw model, treating the ordinal variables as continuous.

But going to raw with a thresholds matrix and means, it returns the following error.

> m1 = mxRun(m1);
Running m1
Error in runHelper(model, frontendStart, intervals, silent, suppressWarnings, :
BLAS/LAPACK routine 'DSYMV ' gave error code -5

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No user picture. MG Joined: 10/29/2010

AE error message

Hi,
I just upgraded to the newest version of OpenMx and R 2.15.0. I ran a simple univariate script and everything worked fine until the AE model. This is the error I get when I run the univAEFit:

> univAEFit <- mxRun(univAEModel, intervals=T)
Running univAE
Error: Unknown reference to 'AE.VarComp' detected in a confidence interval specification in model 'univAE' in runHelper(model, frontendStart, intervals, silent, suppressWarnings, unsafe, checkpoint, useSocket, onlyFrontend, useOptimizer).

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Picture of user. kspoon Joined: 06/17/2011

Assessing Model Fit - Any Insight?

I was wondering if anyone had some insight on which measure of model fit is the most appropriate (in reference mostly to the 5 different AIC and BIC values output by OpenMX) - both in general situations and in my particular situation. This is most important to us since in our models they aren't agreeing on an answer.

For my particular problem, we're looking at 8 variables (in a twin modeling framework, but we're looking at non-twin models as well) and these variables are split into 4 closely correlated pairs (correlations around .5) that are loosely correlated with one another.

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Picture of user. kspoon Joined: 06/17/2011

Expected covariance matrix is non-positive-definite.

I know there's another similar active thread, but I didn't want to highjack it. Most of the threads I've seen in regards to this error message have some reference to an iteration or line - mine does not. What's in the subject is the entire error.

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Picture of user. tbates Joined: 07/31/2009

Error in allvalues[[i%%length(allvalues) + 1]] : subscript out of bounds

Hi,
getting this error, which is not very informative as to its source: The problem is a mis-use of rnorm which passes in an numeric(0), i.e. empty array.

Would be nice if we could say "Error in path from "Read7N": Empty list passed in for values : values must contain at least one number)"

Error in allvalues[[i%%length(allvalues) + 1]] : subscript out of bounds

Any clues as to how it could be made more diagnostic?

FYI: This is the path model generating it


test <- mxModel("TEST", type="RAM",
manifestVars = manifests,

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Picture of user. brandmaier Joined: 02/04/2010

Conflict between subversion 1.6 and 1.7

I cannot compile OpenMx from SVN.

The repository seems to be running on subversion 1.6 while I am running subversion 1.7. This makes the following version extraction command from the makefile fail:
svnversion -c | sed -e 's/[MS]//g' -e 's/^[[:digit:]]*://'
with the error:
svn: E155036: Working copy '/workspace/OpenMx/trunk' is too old (format 10, created by Subversion 1.6)

I could not found a workaround other than downgrading my subversion to 1.6. Have you encountered this?

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Picture of user. smedland Joined: 08/04/2009

R 2.15.0

Hi
Windows 32 bit R 2.15.0 is returning the following:

> source('http://openmx.psyc.virginia.edu/getOpenMx.R')
Installing package(s) into ‘C:/Users/woad/Documents/R/win-library/2.15’
(as ‘lib’ is unspecified)
Warning: unable to access index for repository http://openmx.psyc.virginia.edu/packages/bin/windows/contrib/2.15
Warning message:
package ‘OpenMx’ is not available (for R version 2.15.0)

Do you have a time line for support of this version?
thanks
Sarah