R version 3.1.0 (2014-04-10) -- "Spring Dance" Copyright (C) 2014 The R Foundation for Statistical Computing Platform: i686-pc-linux-gnu (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. Natural language support but running in an English locale R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. [Previously saved workspace restored] > ## library(metaSEM) > > ## ## Clear all objects > ## rm(list=ls()) > > ## ## Set seed for replication > ## set.seed(1000000) > > ## ## Copy Bornmann07 to my.df > ## my.df <- Bornmann07 > ## ## "Fellowship": 1; "Grant": 0 > ## my.df$Type_MCAR <- ifelse(Bornmann07$Type=="Fellowship", yes=1, no=0) > > ## ## Create 17 out of 66 missingness with MCAR > ## my.df$Type_MCAR[sample(1:66, 17)] <- NA > > ## metaSEM.fit <- meta3X(y=logOR, v=v, cluster=Cluster, x2=Type_MCAR, data=my.df) > > ## ## Get the OpenMx model > ## OpenMx.model <- metaSEM.fit$mx.model > > ## save(metaSEM.fit, OpenMx.model, my.df, file="test5b.txt") > > ## Version "2.0.0.3578" > library(OpenMx) Loading required package: digest Loading required package: MASS > > sessionInfo() R version 3.1.0 (2014-04-10) Platform: i686-pc-linux-gnu (32-bit) locale: [1] LC_CTYPE=en_SG.UTF-8 LC_NUMERIC=C [3] LC_TIME=en_SG.UTF-8 LC_COLLATE=en_SG.UTF-8 [5] LC_MONETARY=en_SG.UTF-8 LC_MESSAGES=en_SG.UTF-8 [7] LC_PAPER=en_SG.UTF-8 LC_NAME=C [9] LC_ADDRESS=C LC_TELEPHONE=C [11] LC_MEASUREMENT=en_SG.UTF-8 LC_IDENTIFICATION=C attached base packages: [1] stats graphics grDevices utils datasets methods base other attached packages: [1] OpenMx_2.0.0-3578 MASS_7.3-33 digest_0.6.4 > > ## Clear all objects > rm(list=ls()) > > ## Load the workspace > load("test5b.txt") > > ## Got an error > OpenMx.fit <- mxRun(OpenMx.model) Running Meta analysis with ML Error in runHelper(model, frontendStart, intervals, silent, suppressWarnings, : BLAS/LAPACK routine 'OMXUNS' gave error code -8 Calls: mxRun -> runHelper -> .Call Execution halted