I am fitting a mixture model for a genetic association test that includes sibships of variable sizes, with observed and missing genotypes; the model specification is based on the Acemix2.R script.
I would like to know if it is possible to obtain the correct number of observed statistics without being necessary to specify it manually in the summary() function.
Also, the mixture models for 4 sibs are very slow (the sibship=4 mixture is a 27 component mixture). Could you give me some suggestions on how to optimize the code for running the scripts faster?
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